Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTKAGFVALIGKPNAGKSTLLNTLLNAHLALVSHKANATRKLMKCIVPFKDKEGY-ESQIIFLDTPGL-----HHQEKLLNQCMLSQALKAMGDAELRVFLASVHDDLKGYEEFLSLCQK--------PHILALSKIDTATHKQVLQKLQEYQKYSSQFLALVPLSAKKSQNLNALLECISKHLSPSAWLFEKDLMSDEKMRDIYKEIIRESLFDFLSDEIPYESDVMIDKFIEEERIDKVYARIIVEKESQKKIVIGKNGVNIKRIGTNARLKMQEVGEKKVFLNLQVIAQKSWSKEEKSLQKLGYIYQRNRD |
| 2E87 Chain:A ((170-338)) | -------VVIAGHPNVGKSTLLKALTTAKPEIASYPF-TTRGI--NVGQFED--GYFRYQII--DTPGLLDRPISERNEIEKQAIL--ALRYLGNLIIYIFDPSEHCGFP-LEEQIHLFEEVHGEFKDLPFLVVINKIDVADEENI-KRLEKFVK--EKGLNPIKISALKGTGIDLVKEEIIKTLRPLAEKVAREKIERELRRYRSY------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110991 for 1171 contacts (-94.8/contact) +
2D Compatibility (PS) -16574 + (NN) -5743 + (LL) 10884
1D Compatibility (HY) -10000 + (ID) 2750
Total energy: -135174.0 ( -115.43 by residue)
QMean score : 0.504
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