Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILPALLMGFVGLNASDRLLEIMRLYQKQGLEVVGQKLDSYLADKSFWAEELQNKDTDFGYYQNKQFLFVADKSKPSLEFYEIENNMLKKINSSKALVGSKKGDKTLEGDLATPIGVYRITQKLERLDQYYGVLAFVTNYPNLYDTLKKRTGHGIWVHGMPLNGDRNELNTKGCIAIENPILSSYDKVLKGEKAFLITYEDKFSPSTKEELSMILSSLFQWKEAWARGDFERYMRFYNPNFTRYD--G--MSFNAFKEYKKRVFAKNEKKNIAFSSINVIPYPNSQNKRLFYVVFDQDYKAYQQNKLSYSSNSQKELYVEIE--NNQASIIMEK |
| 3FSD Chain:A ((14-127)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DDIAFYEERLRAAMLTGDLKGLETLLADDLAFVDHTGCVKTKQTHLEPYRAGL--LKLSRLDLSDAVVRAAGE----DGRVVVVRAVTAGVYDGE-AFTETLRFTRIWRRTQGPAGWKLVAGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FSD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40755 for 716 contacts (-56.9/contact) +
2D Compatibility (PS) -11621 + (NN) -204 + (LL) 13940
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -40790.0 ( -56.97 by residue)
QMean score : 0.402
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