Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFRKLATSVSLISLLISNALYAKEISEADKVIKATKETKETKKEAKRLKKEAKQRQQIPDNKKPQYVSVDDTKTQALFDIYDTLNVNDKSFGDWFGNSALKNKTYLYAMDLLDYNNYLSIENPIIKTRAMGTYADLIIITGSLEQVNGYYNILKALNKRNAKFVLKINDKIPYAQATFLRVPKRSDPNAHTLDKGASIDESKLFEQQKKMYFNYANDVICRPNDEVCSPLRDEMVAMPTNDSVTQKPNIIAPYSLYRLKETNNANEAQPSPYATQTAPENSKEKLIEELIANSQLIANE------------EEREKKLLAEKEKQETELAKYKLKDLENQKKLKALEAELKKKNTKKPRVVEVPIPPKTSDSDETMRVIKEKENYNGLLVDKETTIKRSYKGTLISENSYSKKTPINLEDLRSLEEEIKSYYVKSNGLCYANGINLYVKIKNDPYKEGMLCGYESVQKLLSPLRDKLKYDKQKLQKALLKDLK |
| 4APH Chain:A ((5-109)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EAEASKFVEEYDRTSQVVWNEYAEANWNYNTNITTETSKILLQKNMQ---IANHTLKYGTQARKFDVNQLQ----NTTIKRIIK-----KVQDLERAALPAQELEEYNKILLDMETTYSVATVCHPNGSCLQLEPDLTNVMATSRKYEDLLWAWEGWRDKAGRAILQFYPKYVELINQAARLNGYVDAGDSWRSMYETPSLEQDLERLFQELQPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4APH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50838 for 553 contacts (91.9/contact) +
2D Compatibility (PS) -10164 + (NN) -6872 + (LL) 18760
1D Compatibility (HY) -3600 + (ID) 1500
Total energy: 47462.0 ( 85.83 by residue)
QMean score : 0.445
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