Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSLREQKLLKILENDVLTILDSFSNYLFELREELDFIEEEMEGEITEQNLTALYDFSNFLEDHVNVFYENVLNIDD--------VKTEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYAYFMLETIRQSYR--------------ILRLLEKPINNNISEDMQS-DIENFFVQANFLEY-YVQNKIYPTNHAYDFTHLIMDSIIPNWIQIDMSVEAKKKELFEKYFQNIDEVTNKMLDQENQNKNSD |
| 1L8W Chain:A ((52-342)) | ------GGLVAEAFGFKSDPKKSDVKTYFTTVAAKLEKTKTDLN-SLPTAVEGAIKEVSELLDKLVKAVKTAEGASSGTAAIGEVVADADAAKVADKASVKGIAKGIKEIVEAAGGSEKLKAVAAAKGENNKGAGKLFGKAGAAAHGDSEAASKAAGAVSAVSGEQILSAIVTAADAAEQDGKKPEEAKNPIAAAIGDKDGGAEFGQDEMKKDDQIAAAIALRGMAKDGKFAVKDG--------------EKEKAEGAIKGAAESAVRKVLGAITGLIGDAVSSGLRKVGDS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12058 for 2031 contacts (5.9/contact) +
2D Compatibility (PS) -26088 + (NN) -14119 + (LL) 1608
1D Compatibility (HY) 12800 + (ID) 800
Total energy: -14541.0 ( -7.16 by residue)
QMean score : 0.277
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