Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALFEDIQAVIAEQLNVDAAQVTPEAEFVKDLGADSLDVVELIMALEEKFNIEIPDEQAEKIVNVGDVVKYIEDNKLA
2FAD Chain:A ((5-76))
----ERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA-
General information:
TITO was launched using:
RESULT:
Template:
2FAD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40503 for 474 contacts (-85.4/contact) +
2D Compatibility (PS) -7700 + (NN) -4008 + (LL) 836
1D Compatibility (HY) -7200 + (ID) 2000
Total energy: -60575.0 ( -127.80 by residue)
QMean score : 0.832
(partial model without unconserved sides chains):
PDB file :
Tito_2FAD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FAD-query.scw
PDB file :
Tito_Scwrl_2FAD.pdb
: