Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTIKSIPIRTFILLYKSSPKCVVLASITVLFVG-ILPSLNILV--MIKLIDIVVNLLQKHTHFEYSLLLPTLLLWGALLFLTHVFSGILSSLQTIIAEQFSINIITQLANKLTQVKNLNFFENKDHTIKLNTIHNGLHIRPLNY--VSNLFFNL-QRIIGLI-------SLFGILFSISIYLPFIMIFATVPCILISNHIAKKHSASIDKLQDQKESMQNYLYSGLDNQKNKDNLLFNFMLNFHHKFIETKELYLNNFVKVAQKNLIFTIYA------DVLITTLSIALFFLMV--FIILSKLIGVGAIAGYIQAFSSTQQQLQDLSFYGKWFFAINKYFENYFCILDYKIPKPETQIKLEEKI--HSITFENISFSYPNSK--LIFENFNLSLHSNKIYALVGKNASGKSTLINLLLGFY--TPNSGQIIINNKYPLQDLELNSYHQQMSAIFQDFSLYAGYSIDDNLFMQNNITKEQLKQKREILKSFDENFQNCLNDCNNTLFGAQYNGVDFSLGQKQRIATMRAFLKPSNCIVLDEPSSAIDPIME---KEFLDFIFKKSQSKMALIITHRMNSVKQANEIIVLDQGKLIEQGNFETLMK--KQGLFCELFLKQQY |
| 3WME Chain:A ((16-595)) | ---------RIFALAWSSSATMIVIGFIASILEGATLPAFAIVFGRMFQVFTKSKSQIEGET-WKYSVGFVGI---GVFEF---IVAGSRTALFGIASERLARDLRVAAFSNLVE-QDVTYFDRRKAGELGGKLNNDVQVIQYSFSKLGAVLFNLAQCVVGIIVAFIFAPALTGVLIALS---PLVVLAGAAQMIEMSGNTKRSSEAYASAGSVAAEVFSNIRTTKAFEAERYETQRYGSKLDPLYRLGRRRYISDGLFFGLSML-VIFCVYALALWWGGQLIARGSLNLGNLLTAFFSAILGFMGVG------QAAQVWPDVTRGLGAGGELFAMIDR-------VPQYRRPDPGAEVVTQPLVLKQGIVFENVHFRYPTRMNVEVLRGISLTIPNGKTVAIVGGSGAGKSTIIQLLMRFYDIEPQGGGLLLFDGTPAWNYDFHALRSQIGLVSQEPVLFSGTIRDNILYGKRDATDEEVIQALREANAY--SFVMALPDGLDTEVGER--GLALSGGQKQRIAIARAILKHPTLLCLDESTSALDAESEALVQEALDRMM-ASDGVTSVVIAHRLSTVARADLILVMQDGVVVEQGNHSELMALGPSGFYYQLVEKQLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -264860 for 3970 contacts (-66.7/contact) +
2D Compatibility (PS) -57930 + (NN) -31014 + (LL) 3348
1D Compatibility (HY) -35200 + (ID) 7200
Total energy: -392856.0 ( -98.96 by residue)
QMean score : 0.301
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