Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKATQSTINDFFALTGTIFSIPVYQRNYTWEEENCEKLLQDIVNISQNKKTHFMGSITYILHLIDDEKSLRQLQEFVIIDGQQRITTIMLLLKAIETKIQNEGIKKEIDGLLNLSGQRLRLKPIKSDKEAFDLVMQNRSHEIQGVSHIKNNYKFFTKELDNYISKGYRIEEIYGAFLWLKIVAIGLELGEDDPQVVFESINATGVQLKGLDLIRNYLMMGENSDNQNRLYNTYWVPLENWLGEKDLNDFIKTYLRIYFEDRVKEGEREVYYALKAHHRDNFPNNIQGLMSDMREYGRIFQIFLDRDHYFLHRGDPQQLANLRLRVKDLVKIKFGVAKPFVLRCARDFEEGKLDYENFHEILQILISYFVRRSVCGDSTPTLTRVLYSLYRQLGEDVSADALKRYLGKSVGQMAFPNDDKIKAAFLVRNAYAANQVCKFILLEIEKLSNAEPPKEENLEVEHFYPKTPTQEWRDRVGDYFTFEQDYLNNFGNLTLSGQNQRLGNKSYEAKIALMEEYSSLHLNDYFTNNTDSWGIEEVRARSEYLADQFCQVGLFKDLPKEYRARELHKTLDDNLTNH-NLQSVKLPNDQRRMAGNAKELASVVIDYLLENAREAFESYTDDESQKYIYWSKAKAEARDRDGTLVVP---------FEKYGFYFVSNASYQTTGSNLKDLILGCNLNPRDFVVE |
| 1M2V Chain:B ((716-805)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SLTKHMAFRSGIVPSDHRASALN--NLESLPLKYLIKNIYPDVYSLHDMADEAGLP------------GTIVLPQPINATSSLFERYGLYLIDNGNELFLWMGGDAVPALVFFNQRVRNII |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M2V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1957 for 354 contacts (5.5/contact) +
2D Compatibility (PS) -7607 + (NN) -865 + (LL) 41960
1D Compatibility (HY) -6400 + (ID) 1300
Total energy: 27745.0 ( 78.38 by residue)
QMean score : 0.171
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