Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRFFILFFMGMLGVGFSQTELDLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSALQKAMQEKGVENSDKSPDAKMPEDIYCKQITLESMLETTDAFQASCIAIALKSKIRDFDKIPIQTFKPLQEKIKEAYPILYEELEILQSKNVSASLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALAKSNATQSNAQTFFILGINEILHKKTSKALKYFERSEAVVKDDDFSKDRAIFWQYLASKKKKTLEHLSQSPALNLYSLYASRKLKTTPSYRIISHIQNLSQENPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNTDERAMAYAIARQESFLLPALISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLK-------KEFNHPLFVAYAYNAGPGFLRRWLESSKRFKGKNHFEP--WLSM-ELMP-------YSETRMYGFRVMLNYLIYQEIFGNFIPIDAFLEQTLNSKDKP |
4OWD Chain:A ((253-408)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YTFAQHLQQRLPRYESHFKQSGKQLDTDWRLLA-AIGYQESLWQPGATSKTGVRGLMML----TNRTAQAMGVSN-----RLDPKQSIQGGSKYFVQIRSELPESIKEPDRSWFALAAYNIGGAH----LEDARKMAEKEGLNPNKWLDVKKMLPRLAQKQWYAKTR-YGYARGGETVHFVQNVRRYYDILTWVTQPQ------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61514 for 1007 contacts (-61.1/contact) +
2D Compatibility (PS) -14197 + (NN) -682 + (LL) 30024
1D Compatibility (HY) -4400 + (ID) 2150
Total energy: -52919.0 ( -52.55 by residue)
QMean score : 0.275
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