Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQEIEIFCDGSSLGNPGPGGYAAILRYKDKEKTISGGENFTTNNRMELRALNEALKILKRPCHITLYSDSQYVCQAINVWLVNWQKKNF-----AKVKNVDLWKEFVKVSKGHSIVAVWIKGHNGHAENERCNSLAKLEAQKRVKTTT
1KVB Chain:A ((2-141))
LKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCHELARAAAMNPTLEDT
General information:
TITO was launched using:
RESULT:
Template:
1KVB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56918 for 1064 contacts (-53.5/contact) +
2D Compatibility (PS) -14556 + (NN) -7922 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3700
Total energy: -91496.0 ( -85.99 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1KVB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KVB-query.scw
PDB file :
Tito_Scwrl_1KVB.pdb
: