Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVDSFNRVIDYIRVSVTKQCNFRCQYCMPTTPLD----FFDDEELLPLDNVLEFLKIAIDEGVKKIRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGFSLKKMAKGLKDAGLSRVNVSLDSLKSDRVLKISQKDALKNT-LEGIEESLKVGLKLKLNTVVMKGVNDDEILELLEYAKNRSIQIRYIEFME--NTHAKSLVKGLKEKEILDLIAQKYKIMGMEKPKQGSSKIYTL--ENGYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
2FB2 Chain:B ((7-280)) | ---DKLGRPIRDLALSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPLMRRDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGLNVKVNVVIQKGINDDQIIPMLEYFKDKHIEIRFIEFMDVGNDNGWDFSKVVTKDEMLTMIEQHFEIDPVEPKYFGEVAKYYRHKDNGVQFGLITSVSQSFCSTCTAAALSSDGKFYGCLFATVDGFNVKAFIRSGVTDEELKEQFKALWQIRDDRYSDERTAQTVANRQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FB2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118813 for 2030 contacts (-58.5/contact) +
2D Compatibility (PS) -28964 + (NN) -18580 + (LL) 856
1D Compatibility (HY) -27200 + (ID) 5650
Total energy: -198351.0 ( -97.71 by residue)
QMean score : 0.492
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