Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQKISVALKEIKRGANEIIGLEYIEKLVRKYYETNERFIVKAGFDPTAPDLHLGHTVLIQKLALLQQYGARVKFLIGDFTAMIGDPTGKNETRKPLNREQVLENAKTYKEQIYKILD----QKHTEVCFNSAWLDALGAKGMIELCAK-FSVARMLERDDFAKRY-KENRPISIVEFLYPLLQGYDSVAM----GADIELGGNDQKFNLLVGRFLQRAYGLNKEQSI-ITMPLLEGLDGVQKMSKSLGNYVGITEE---PNAMFGKIMSVSDDLMWRYYTLLSAKTLEEIEDLKHGILHQTLHPKAVKEDLASEIVARYYDNDQAFKAKEQFSKVFSANLLPEILLESDFDEGVGVLDVLKQIGFCPSTSQARRDIQGGGVKINQEVVKDESYRFVKGNYVIQLGKKRFMKLNIN |
| 2YXN Chain:A ((38-322)) | ------------------------------------------CGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLCIGGSDQWGNITSGIDLTRR--LHQNQVFGLTVPLITKADGT-KFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRA--QYVLAEQVTRLVHGEEGLQAAKR------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YXN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75571 for 2070 contacts (-36.5/contact) +
2D Compatibility (PS) -29333 + (NN) -12701 + (LL) 9948
1D Compatibility (HY) -14800 + (ID) 4250
Total energy: -126707.0 ( -61.21 by residue)
QMean score : 0.520
|
|
|