Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQA-AFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGE----------IAFKYDA---------------QIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDG----GASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP |
| 4POX Chain:A ((5-256)) | ------------------------------KSITIATEGSYAPYNFKDAGGKLIGFDIDLGNDLCKRMNIECKFVEQAWDGIIPSLTAGRYDAIMAAMGIQPAREKVIAF--SRPYLLTPMTFLTTADSPLLKTQVAIENLPLDNITPEQKAELDKFTKIFEGVKFGVQAGTSHEAFMKQMMPSVQISTYDTIDNVVMDLKAGRIDASL-ASVSFLKPLTDKPDNKDLKMFGPRMTGGLFGKGVGVGIRKEDADLKALFDKAIDAAIADGTVQKLSQQWFGYDASP- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4POX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -86710 for 1700 contacts (-51.0/contact) +
2D Compatibility (PS) -24471 + (NN) -14071 + (LL) 2560
1D Compatibility (HY) -14000 + (ID) 3000
Total energy: -139692.0 ( -82.17 by residue)
QMean score : 0.495
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