Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFMRKSYRAVSVDSVTIKSIKAKLG----KNHYHKVSGSHQVGGAHKVISSFNTKNPFFIRQHLKSH
2DJW Chain:A ((4-39))
------AFVLIRPRGNRVQALGEAIAELPQVAEVYSVTGPYDLVALVRLKDVEELDDVVTQGILSLEG
General information:
TITO was launched using:
RESULT:
Template:
2DJW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 782 for 140 contacts (5.6/contact) +
2D Compatibility (PS) -3523 + (NN) -1115 + (LL) 856
1D Compatibility (HY) -2000 + (ID) 100
Total energy: -5100.0 ( -36.43 by residue)
QMean score : 0.601
(partial model without unconserved sides chains):
PDB file :
Tito_2DJW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DJW-query.scw
PDB file :
Tito_Scwrl_2DJW.pdb
: