Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MAKTETDNFNKQDKHKLDYRK--------------INYESKEIDDGKFIRIGDEVNHIFIEKAKINRGYLQNP----KHKRTWWSLWLYKKPSDDALDIKVLDVFDD-GKYTYFRYDRDQAFSKFPYTYKVVDGYDNPINS-----RVVGNYIIAEDISKKWTLRSGKEYVCVRRDKRKYQKSRDFMRLKRL--------LEQDEAMKAKR-----------------------NNMHLIEDTTPQPKNAISVTELLAQIKNQTPSKECRALNEEEVK-TLEEVKNIIKTPKPL--------QKDLKKNAKKHTIKTQYCVPIPYIERLKTTDGLEKHQKGLNNTKKQIQANPIEEIKENKK |
| 1W3B Chain:B ((1-388)) | GPMELAHREYQAGDFEAAERHCMQLWRQEPDNTGVLLLLSSIHFQCRRLDRSAHFSTLAIKQNPLLAEAYSNLGNVYKERGQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W3B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 115958 for 2183 contacts (53.1/contact) +
2D Compatibility (PS) -31036 + (NN) -4758 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 2050
Total energy: 74914.0 ( 34.32 by residue)
QMean score : 0.136
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