Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MNFFDTLMGMFVEPSQKVAKSLAEHVGSFFHAQLILNTIITILFMIWAYKRVKEGDMFEFKTAMGVVVFIAFVGFINWGIKNPNDFNTYFINTIFYPSEKLAILIAQSLNDGLEIPTNTN--LSPSEIFSIGNLASSAYAMIVNLWDNAFDGINMFNWLTMIPKIIMFFLVILGELLFLGLLLIIVLLVTAEIFMWSALGLIVLPLGLIPQTKGMLFSYLKKLISLTLYKPCMMLVAFFNYGIIYKVNTLIPTKHEVTQGFYGNADKMANEGKIIDVFGNVLKGDWNSYIAHSSIVG----------------------FLTIIVLGSVICFFLV---KRVPDFINNIFG--TSGGVGAVTEMMQKIGMTIGGAVFGGSAVMVANQVKQAYQSAGGGLAGLQAGAKAFGLGAISGGASAMANHRSVK------AGVKHFVASVKSGFGFDNDKNNK- |
| 2IUT Chain:A ((70-477)) | LPPLSLLDPAEVKQKSYSPESLEAMSRLLEIKLKEFGVEVSVDSVHPG-------PVITRFEIQPAAGV------------KVSRISNLAKDLARSLAVISVRVVEVIPGKTTVGIEIPNEDRQMVRFSEVLSSPEYDEHKSTVPLALGHD-----------------------IGGRPIITDLAKMPHLLVAGTTGSGKSVGVNAMLLSILFKST-------PSEARLIMIDPKMLELSIYE-GIPHLLCPVVTDMKEAANALRWSVAEMERRYRLMAAMGVRNLAGFNRKVKDAEEAGTPLTDPLFRRESPDDEPPQLSTLPTIVVVVDEFADMMMIVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANIPTRIAFQVSSKIDSRT--ILDQGGAEQLLGHGDMLYLPPGTGLPIRVHGAFVSDDEVHRVVEAWKLRGAPDYIEDILA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IUT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234904 for 3043 contacts (-77.2/contact) +
2D Compatibility (PS) -36602 + (NN) 16369 + (LL) 5092
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -261645.0 ( -85.98 by residue)
QMean score : ?
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