Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRAFLNRSFAPLLNPNENLLDQVKSSIILKKGVSYFDWGASG-LASALVEKRVKSLLPYYANAHSVASKHAILMGMLLKECQEKLKRSLNLSANHCVLSAGYGASSAIKKFQEILGVCIPSKTKKNLEPYLKDMALKRVIVGPYEHHSNEVSWR----EGLCEVVRIPLNEHGLLDLEILEQTLKKTPNSLVSVSAASNVTGILTPLKEVSSLCKE-----------YRAI---------LALDLANFSAHANPKDCEYQTGFYAPHKLLGGVGGCGLLGISKDLIDTQIPPSFSAGGVIKYANRTRHEFIDELPLREEFGTPGLLQFYRSALAYQLRDECGLDFIHKKENNLLRVLVYGLKDLPAINIYGNLTASRVGVVAFNIGGISPYDLARVLS-YEYAIETRAGCSCAGPYGHDLLNLNAQKSSDFNAKPGWLRVSLHFTHSINDIDYLLDSLKKAVKKLR |
| 1ECX Chain:A ((4-371)) | ----------------------------------YFDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVSPSEIFFT-----SCATESINWILKTVAETFEKRK----------RTIITTPIEHKAVLETMKYLSMKGF-KVKYVPVDSRGVVKLEELEK-LVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHK----------FHGPK-------GVGITYIRKGV---PIRPLIHGGG-------------QERGLRS--GTQNVPGIVGAARAMEIAVE-ELSEAAKHMEKLRSKLVSGLMNLGA-HIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVST------------HVLD---AMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165197 for 2730 contacts (-60.5/contact) +
2D Compatibility (PS) -35880 + (NN) -17448 + (LL) 6000
1D Compatibility (HY) -22800 + (ID) 4750
Total energy: -240075.0 ( -87.94 by residue)
QMean score : 0.398
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