Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLFTGACGYIGSHTARVFLEKTKENIIIIDDLSTGFLEHIKALERYYPNRVAFIQANLNETQKLDAFLNKQQLKDPIEAVLHFGAKISVEESMRLPLEYYTNNTLNTLGLVKLCLKHAIKRFIFSSTAVVYGESGSSLSEES-PLN-PINPYGASKMMSERILLDASKV-ADFKCVILRYFNVAGACMHNDYTTPYTLGQRTLN-ATHLIKIACECAVGKRKKMGIFGTNYPTRDGTCIRDYIHVDDLANAHLASYHTLLEKNKSEIYNVGYNQGHSVKEVIEKVKEISNKDFLVEILDKRQGDPASLIANNSKILQNTPFKPLYNNLDTIIKSALSWEEHLLKFQ |
| 1KVR Chain:A ((1-329)) | MRVLVTGGSGYIGSHTC-VQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHA----IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSAATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGD------MGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWR-VTRTLDEMAQDTWHWQSRHPQGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214192 for 2953 contacts (-72.5/contact) +
2D Compatibility (PS) -34778 + (NN) -12937 + (LL) 184
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -289573.0 ( -98.06 by residue)
QMean score : 0.480
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