Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDQEILDVLIVGAGPGGIATVVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRID-----KDYKKQVVELKGHIPFKDSFKEETLE----NFTNL---LKEHRITPSYKTDIESVKKEGELFKITTT--------------SNTTYHAKFVVVAIGKMGQPNRPTTYK--IPVALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIALCKTT-PTTLNYRKKEFSRINEDNAKNLQEVLDNNT---LKSKLGVDIESLEEDNTQIKVNFTDNTSE-----SFDRLLYAIG--GSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAIEIAKRLQS |
| 3DGZ Chain:A ((4-327)) | --QQSFDLLVIGGGSGGLACAKEAAQLG-KKVAVADYVEP-SPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDEHTVRGVDKGGKATLLSAEHIVIATG--GRPRYPTQVKGALEYGITSDDIFWLKE--SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTN--QLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNLEKAGISTNPK-NQKIIVDAQEATSVPHIYAIGDVAEGRPELTPTAIKAGKLLAQRLFGKSST |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63707 for 2150 contacts (-29.6/contact) +
2D Compatibility (PS) -29582 + (NN) 520 + (LL) 784
1D Compatibility (HY) -14400 + (ID) 3600
Total energy: -109985.0 ( -51.16 by residue)
QMean score : 0.325
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