Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKKRVFSGIQPTGQIHLGNYLGAIKHWVELQDEYENLFCIVNSHAITLPIEPIFLKSQTYELVKLLLACGISPKQSGLFIQSEVDEHPALAWLLDCQVSMGEMQRMTQFKDKSLKNPKSVNVGLFNYPILMASDILLYQSDLVPVGEDQKQHLELTRNVAEKFNRDFGNCFKVPEPLIAKVGARVMGLDDPKVKMSKSHKGANHAIFLLDEPDVIVKKIKKAATDSMGVIAFDETREGVFNLLNIYMLLSDESPEK-IEERFR--NKGYGDFKKELAEVVIQSLKPIQERYQEISD--DEVKAVLNCGAEKARPLARATYQKAKELMGLI |
| 3TZL Chain:A ((5-322)) | ----RVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERAHSYKDKVAKGL-SASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARVNEEVAVVVGTDG--AKMSKSYQ---NTIDIFSSEKTLKKQISSIVTDSTALE--DPKDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKEAREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164513 for 2448 contacts (-67.2/contact) +
2D Compatibility (PS) -33342 + (NN) -10658 + (LL) 816
1D Compatibility (HY) -22400 + (ID) 6050
Total energy: -236147.0 ( -96.47 by residue)
QMean score : 0.457
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