Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRFDLRPLKADIFERLEELIEKEMQPNEVAIFMFEVGD--FSNIPKSAEFIQSKGHELLNSLRFNQADWTIVVRKKA
3ZIE Chain:A ((14-53))
----------------VPEIKR-EIYDGNIVVADIAFIKHDKLTLDRVLKDLRQLAEDVKGDIVGLGEDYVIMTPTGI
General information:
TITO was launched using:
RESULT:
Template:
3ZIE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2926 for 174 contacts (-16.8/contact) +
2D Compatibility (PS) -4324 + (NN) -1468 + (LL) 1476
1D Compatibility (HY) -1600 + (ID) 100
Total energy: -8942.0 ( -51.39 by residue)
QMean score : 0.525
(partial model without unconserved sides chains):
PDB file :
Tito_3ZIE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZIE-query.scw
PDB file :
Tito_Scwrl_3ZIE.pdb
: