Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFGLKQFYQNEVRAKLAQELDIKNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLVAGQKAVITKAKKSVAGFKIREGMAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRNGFDGRGNYTFGINEQLIFPEVVYDDIMVSHGMNITMVTSTDNDKEAFKLLELLGLPFAKVR
4XXB Chain:A ((13-133))
--------------------------RELRIRKLCLNICVGESGDRL---TRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGL-----KVREYE-LRKNNFSDTGNFGFGIQEHIDLG-IKYDPSIGIYGLDFYVVLGRPGKHRISKEEAMRWFQQKYDG
General information:
TITO was launched using:
RESULT:
Template:
4XXB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -76720 for 812 contacts (-94.5/contact) +
2D Compatibility (PS) -12753 + (NN) -1172 + (LL) 3108
1D Compatibility (HY) -9200 + (ID) 1500
Total energy: -98237.0 ( -120.98 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_4XXB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4XXB-query.scw
PDB file :
Tito_Scwrl_4XXB.pdb
: