Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLFDYAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFCAFNLTPPYAVKIILLGQDPYHSTYLENEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPV-PCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILIRLFETTTPLIVVLLGKVAQKKIALIPKNKHIIITAPHPSPLS--RGFLGSGVFTSVQKAYREVYRKDFDFSL
1YUO Chain:A ((88-301))-----------SWKKHLSGEFGKPYFIKLMGFVAEERKH-YTVYPPPHQVFTWTQMCDIKDVKVVILGQDPYHGP---NQ-----AHGLCFSVQRPVPPPPSLVNIYKELSTDIEDFVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLVFLLWGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGFFGCRHFSKTNELLQKSGKKPIDWKE


General information:
TITO was launched using:
RESULT:

Template: 1YUO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126989 for 1673 contacts (-75.9/contact) +
2D Compatibility (PS) -22627 + (NN) -10564 + (LL) 1608
1D Compatibility (HY) -14800 + (ID) 4450
Total energy: -177822.0 ( -106.29 by residue)
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_1YUO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YUO-query.scw
PDB file : Tito_Scwrl_1YUO.pdb: