Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVLNFLTNINVIFTLLGYLIGGIPFGYALMKIFYGMDITKIGSGGIGATNVLRALQSKGVSNAKQMALLVLILDLFKGMFAVFLSKLFGLDYSLQWMVAIASILGHCYSPFLNFNGGKGVSTIMGSVVLLIPIESLIGLTVWFFVGKVLKISSLASILGVGTATVLIFFVPYMHIPDSVNILKEVGTQTPMVLIFIFTLIKHAGNIFNLLTGKEKKVL
3PSE Chain:A ((1-164))
--GPMDFLRSLDWTQVI-----AGQYVSNPRFNISDYFEIVRQPGDGNCFYHSIAELTMPNKTDHSYHYIKRLTESAARKYYQEEPEARLVGLSLEDYLKRMLSDNEW---------------------------------------GSTLEASMLAKEMGI---TIIIWTVAA---SDEVEAGIKFGDGDVFTA---VNLLHSGQTHFDALRILPQFE-
General information:
TITO was launched using:
RESULT:
Template:
3PSE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -127561 for 1258 contacts (-101.4/contact) +
2D Compatibility (PS) -18263 + (NN) -7642 + (LL) 4540
1D Compatibility (HY) 1200 + (ID) 1250
Total energy: -148976.0 ( -118.42 by residue)
QMean score : 0.227
(partial model without unconserved sides chains):
PDB file :
Tito_3PSE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PSE-query.scw
PDB file :
Tito_Scwrl_3PSE.pdb
: