Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFK---GYFDFWNCAIKKGYSGVVTFTKKEPLSVSYGIDIKEHDKEGRVVTCEFESFYLVNVYTPNSQQALSRLSYRMSWEVEFKKFLKALELKKP----VIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV
3G2C Chain:A ((4-252))
LKIISWNVNGLRAVHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERKGYSGVAMYTKVPPSSLREGFGVERFDTEGRIQIADFDDFLLYNIYFPNGKMSEERLKYKLEF---YDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIENGYVDTFRMFNSDPGQ-YTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSWILSDVMGSDHCPIGLEIE
General information:
TITO was launched using:
RESULT:
Template:
3G2C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115395 for 1974 contacts (-58.5/contact) +
2D Compatibility (PS) -26453 + (NN) -16053 + (LL) 544
1D Compatibility (HY) -24000 + (ID) 5150
Total energy: -186507.0 ( -94.48 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3G2C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G2C-query.scw
PDB file :
Tito_Scwrl_3G2C.pdb
: