Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGEQDNRRGKKLRNGDVILVPGVGKVKIEQGK
2VQE Chain:D ((93-152))
-----FLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKS--------
General information:
TITO was launched using:
RESULT:
Template:
2VQE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24461 for 397 contacts (-61.6/contact) +
2D Compatibility (PS) -6571 + (NN) -2381 + (LL) 1308
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -34205.0 ( -86.16 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_2VQE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VQE-query.scw
PDB file :
Tito_Scwrl_2VQE.pdb
: