Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKLIQFLFIAVVLFLVEYVLINQAAILFLVTSGIIQLCGVIIAIRLLLFDQRNTSSKVAWVAVIFILPVLGTISYLVFGRNPATRKFSTAQVKEKTKLINAIHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAEN-----HIHIQYYIFKTDAISTEIRDILVEKAKSGVEVRFMFDGLGSSK--LGKAFLAPLKEAGVSIHAFDPIASPWIVRTANLRNHRKIVVIDGQ-------IGFTGGLNIGEEYRSNTPDFRVWRDTHIKITGQ-AVIELQESFLNDWVYMENQAGAADGFISESGSKQYFSPVDMGDEWAQVIYGGPYDKEKWVRDSMLDLIDSAK----ESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGISFHGSNAYVKTMIEA--GAKMYAYADDSFVHAKAMLVDGT---RAAIGTANFDVRSFRLNHELMVFLYDESEAMHHLKRDFKKDFE---DSRLFTMKDMENKPLLTRIKEVLSSLLSPIL
1XDP Chain:A ((340-657))---------------------------------------------------------------------------------------------------------------------------------------VLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKD---SRIIDSMIHAAHNGKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPG----------LKIHAKLFLISRKENGEVVRYAHIGTGNFNEKTAR------LYTDYSLLTADARITNEVRRVFNFIENPYRPV--TFD----------------------YLMV-SPQNSRRLLYEMVDREIANAQQGLPSGITLKLNNLV-DKGLVDRLYAASSSGVPVNLLVRGMCSLI----------PNLEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEVATPLLDPR-LKQRVLDIIDILFSDTVKARYIDKEL----------------------


General information:
TITO was launched using:
RESULT:

Template: 1XDP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139829 for 2500 contacts (-55.9/contact) +
2D Compatibility (PS) -31783 + (NN) -9600 + (LL) 16936
1D Compatibility (HY) -14000 + (ID) 2600
Total energy: -180876.0 ( -72.35 by residue)
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_1XDP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XDP-query.scw
PDB file : Tito_Scwrl_1XDP.pdb: