Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLAIWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMGDMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPVGLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSR-AVPVFIMLTFGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAYLKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED |
1VK5 Chain:A ((36-156)) | ----------------------------------------------------GSLLRRAEMYQDYMKQVPIPTNRGSLIPFTSWVGLSISMKQLYGQPLHYLTNVLLQRWDQSRFGTDSEEQRLDSII---HPTKAEATIWLVEEIHRLTPSHLHMALLWRSDPMYHSFIDPIFPE-------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VK5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -83386 for 800 contacts (-104.2/contact) +
2D Compatibility (PS) -12264 + (NN) -1838 + (LL) 12752
1D Compatibility (HY) -800 + (ID) 1050
Total energy: -86586.0 ( -108.23 by residue)
QMean score : 0.050
|
|
|