Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPSMKRQIAQTGIIHRPLPIETEHALETLAKKKQVLSSRTLFSSKQHVSLEFTHQGAGDFTISGQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISASIGNEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGTVKVPDIYGREGVHGVNLINHEWNDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWLPQNNTLIYSHNGYSKDMPKVAFCANKHAATTFTIHDKETDKVVFTGKSYQNATETGNFVILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVF----GKHTTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMAASLPEKE--ETLRMRLLEEGEWGLDFILKTRFGDGFRATSA-----GMTRWTDGLVGGMDDAIARV-------HNQAYENFYCAGIEAYIGSQIAD-NATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLYYATASWAASMVYQLTNKEIYAEKAAEWLDLMLEAQEKAGIRDSETSELYKGFFYRDKSHKVIQHFNHQAREHLYLLALEAALETQPSHAEKQTWLQAVEMYGDYLKKVTRFTKPYPLIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIKINDEVALRKFPIWFSFRGNNAILLSAGKAASIAGKIL-KDKALLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQYSV--LNGE---------------ITGEIPVGMETF-RNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITGKS |
| 1KS8 Chain:A ((3-431)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQ---GDQGQDLTGGYFDAGDFVKFGFPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDADHAFWG----RPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANNYRGKY--SDSITDARNFYAS--ADYRDELVWAAAWLYRATNDNTYLNTAESLYDEFGLQN------------WGGGLNWDSKVSGVQVLLA----------------KLTN----KQAYKDTVQSYVNYLINNQQ-KTPKGLLYI------------------------------------------------DMW----GTLRHAANAAFIMLEAAELGLSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPAPATCDWNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -77728 for 3696 contacts (-21.0/contact) +
2D Compatibility (PS) -41793 + (NN) -24016 + (LL) 25464
1D Compatibility (HY) 5200 + (ID) 3550
Total energy: -116423.0 ( -31.50 by residue)
QMean score : 0.357
|
|
|