Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITIIAAFFLLVNNVLLQPENGLLKFIPNVENYLGV--GIQVYNATLGIMAILAAFLIG---NFLAKSYGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAALVSITMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMSIPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGA-ISGPVLLTSLQQNIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIPSIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPPVLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAVTNGEV |
| 1B9H Chain:A ((5-388)) | ------KAPEFPAWPQYDDAERNGLVRALE--------------------QGQWWRMGGDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQAAQRLGAVTVPVDVDAATYNLDPEAVAAA------VTPRTKVIMPVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQG-------KRVGELDSIATFSFQN-------GKLMTAGEGGAVVFPDG-----ETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLAR-------------------LDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVARA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B9H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -368666 for 3421 contacts (-107.8/contact) +
2D Compatibility (PS) -39212 + (NN) 257 + (LL) 6704
1D Compatibility (HY) 6800 + (ID) 2100
Total energy: -396217.0 ( -115.82 by residue)
QMean score : 0.116
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