Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKKKKFRLFDAVLMAVCVVLVVESAAP-AA----AIGSSQFFWWIALLILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVLFVEVITQIFP--VS-FGTPVSILIQLIFVWIVVIVSCYPVSDSKWILNIAAFCKVAIMLCLGVLGIYFAITKGLANDFSGKALLPTFDLESLSFISVILFNFLGFEVVTTLASDMENPKKQIPQAIIYGGILIAFFYLLAAFGMGAAIPTSELSTSGGLIDSFIMLIGGVNPFVIIIGIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNDMPTGTSILNGIVASVLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKLDPDRERPFKVPGGKILLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTIVAVIVGEICIWLAGKRKDKGEIKNEND |
| 2JLN Chain:A ((22-180)) | -YAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTI-AVILLFFTQSAAIRWG--INFTVAARMPFGIRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLTGFTNL---PLWIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78718 for 788 contacts (-99.9/contact) +
2D Compatibility (PS) -15410 + (NN) -3347 + (LL) 23284
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -78691.0 ( -99.86 by residue)
QMean score : 0.101
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