Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFYEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAECFVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIESVRVLEPSKIKKITKKLVNKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYRQAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDINLYIFTDEIEM--NNLDITSRIS--TIAIMELILYQFMEDETSSF |
| 1M3S Chain:A ((8-172)) | ---------------------------------------------------------------------------------------------AEILNELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEI--L---TPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHG-I-VAALTINPESSIGKQADLIIRMPGSPKD-YKTIQPMGSLFEQTLLLFYDAVILKLMEKKGL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M3S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85661 for 1260 contacts (-68.0/contact) +
2D Compatibility (PS) -17012 + (NN) -9575 + (LL) 8604
1D Compatibility (HY) -6000 + (ID) 1450
Total energy: -111094.0 ( -88.17 by residue)
QMean score : 0.598
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