Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNNDMPGLKYYFENNIVPINKTIESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPVNMPPIYK---IFEEG--FSTKGEGRGLGLASLREIMKKYSHVALDTKVTDREVIQELEIM |
| 1ID0 Chain:A ((44-123)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFVEVMGNVLDNACKYCLE----FVEISARQTDEHLYIVVEDDGP--GIPLSKREVIFDRGQRVDTLRPGQGVGLAVAREITEQYE-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ID0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35852 for 393 contacts (-91.2/contact) +
2D Compatibility (PS) -8531 + (NN) -6384 + (LL) 34876
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -23641.0 ( -60.16 by residue)
QMean score : 0.473
|
|
|