Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAALSTLSAQKKKEDKLAAEELAEAKALKEKMENLTVELKAKSGEGGRLFGSITSKQIAQTLEKTHGIKIDKRKMDLPEAIRALGHTKVPVKLHHEVTATLDVHVSEE
3J5L Chain:H ((1-51))
MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNIEFFEARR-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J5L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19751 for 324 contacts (-61.0/contact) +
2D Compatibility (PS) -5389 + (NN) -829 + (LL) 7724
1D Compatibility (HY) -5200 + (ID) 1000
Total energy: -24445.0 ( -75.45 by residue)
QMean score : 0.346
(partial model without unconserved sides chains):
PDB file :
Tito_3J5L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J5L-query.scw
PDB file :
Tito_Scwrl_3J5L.pdb
: