Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKIDYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL
2BWF Chain:A ((4-72))
-----SLNIHIKSG---QDKWEVNVAPESTVLQFKEAINKANGIP-----VANQRLIYSGKILKDDQTVESYHIQDGHSVHL-
General information:
TITO was launched using:
RESULT:
Template:
2BWF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52861 for 477 contacts (-110.8/contact) +
2D Compatibility (PS) -7350 + (NN) -3160 + (LL) 664
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -66357.0 ( -139.11 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_2BWF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BWF-query.scw
PDB file :
Tito_Scwrl_2BWF.pdb
: