Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKKNLEQIYAIEFTMGLRYRPMQIRHNIKLIFLLLLFVTWLQGDFMNRLPGNLDITKVDMPLVLLALLCYIILYPQKMTIRFQNLQYLLYICCFQFLVFMVIRYFYSNLIYGIQNMVSLTAQTLVASYVFLLVLWILALIFFYFHFRKKLRNGDYRKDSELQKKRSNLGLKLSKGSYILIGAFFVFILSSQIVGGIMVDIMIISIEIVGIALCSMGIVIFPEQLFTAYCKFKFKEFHIEE |
| 3PLV Chain:C ((1-21)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------SLSIEETNELRASLGLKLIPP----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PLV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 9786 for 93 contacts (105.2/contact) +
2D Compatibility (PS) -2212 + (NN) -239 + (LL) 22848
1D Compatibility (HY) -400 + (ID) 350
Total energy: 29433.0 ( 316.48 by residue)
QMean score : 0.533
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