Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFQLMIFMIIRVFYFAIFYLLENEILVTAQFITNAYITLCIIWVISFAIFSFRFKKKLDKGGYRKDSKLQQKRSNLGLNLSKGTYFLILGSFGLFILIRMLIGGELEEIIISLFLIVCILIGIAGVSLFPEHLFTAYCKFNFKEFHIEE
2C5F Chain:A ((295-339))
-------------------------------------------VIDGEFFPTSLESMLNSGNFKKTQIL------LGVNKDEGSFFLLYGAPGF-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2C5F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4697 for 170 contacts (-27.6/contact) +
2D Compatibility (PS) -4530 + (NN) 1522 + (LL) 12068
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -1187.0 ( -6.98 by residue)
QMean score : 0.071
(partial model without unconserved sides chains):
PDB file :
Tito_2C5F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C5F-query.scw
PDB file :
Tito_Scwrl_2C5F.pdb
: