Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSRIDIGEIQAFLYQLRATNEPGRKTIQSIKAAVTKYVGDNSLKGKAVDASKNYYQMTYFPLCDAIIEAMDESEERLGQYIQDFHAEVDSSPDAKIDADGLYELGKMIDRIESKKEALAQRMNSGTEGQMQNYRSQLAIAYKQENILEKYLSFEQSHANFFDHLIDLVQAVQQTIRELQSNIQFNSQTGTYDLSKLNSATVSRMQQALNKSRGIKEDIIKELRDYTVLAVVYLDSNGKEQVMWLLERDGVGVENAELKAYLTENGKYLNPEDYTIITNEELNKKINQSWRDGVYYLNGNKYDGLTGGVLSTSAYVEAGKGYIDKSGFADVVLGLGLSTAAIRGSLVYKKVNGPYKQNIKNRYPNEVQQGKIFDYTLENGQVKIRDGIKEVDFIIDLQGNLKVGRGHAHLSNGGDVQAAGKLKVDSNGNVRRITNESGHYTPTLGQAKNYQQIFENTGINTKNAWLETYQLDVTKSGYVDLAKLKRIDSVKLK |
| 3FAV Chain:A ((12-85)) | --------LAQEAGNFERISGDLKTQIDQVESTAGSLQ--GQWRGAAGTAAQAAVVR-FQEAANKQKQELDEISTNIRQAGVQYS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20582 for 378 contacts (-54.4/contact) +
2D Compatibility (PS) -8005 + (NN) 36 + (LL) 24840
1D Compatibility (HY) 1600 + (ID) 350
Total energy: -2461.0 ( -6.51 by residue)
QMean score : 0.346
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