Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MKLKIVSPMGQFFE-GEVEGFVINTKEGQQTVLEEHIDCLSFFDYSEISILDAVASDPIFVALGYLHLVQNEANIMAQFASA------DAEQAERIFERLNKRKQTESRRSNDK----------------
1E79 Chain:H ((15-145))
QMSFTFASPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEALVKAL
General information:
TITO was launched using:
RESULT:
Template:
1E79.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60090 for 664 contacts (-90.5/contact) +
2D Compatibility (PS) -11595 + (NN) -1760 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -76245.0 ( -114.83 by residue)
QMean score : 0.338
(partial model without unconserved sides chains):
PDB file :
Tito_1E79.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E79-query.scw
PDB file :
Tito_Scwrl_1E79.pdb
: