Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGNVIYDIEG--ERVKLGKGDMLIFNPGVSHYDITEPG--MTNAQLHIGFRNFALEGYTRNT--FPFKKAFLRKKEEESAILSISKQIIEEKDAGKPGYDLILKAFVMQLIIHVLREATPEQLENNGVKLSTDEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGESPINYLIKIRLTRAEELLKNKDVSVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKSS |
| 3GBG Chain:A ((22-270)) | --------------------------FNNLYINDYKMFWIDSGIAKLIDKNCLVSYEINSSSIILLKKNSIQRFSLTSLSDENINVSVITISDSFIRSLKSYILG---NKDLLLWNC-EHNDIAVLSEVVNGFRE-INYSDEFLKVFFSGFFSKVEKKYNS-----------IFITDDLDAMEKISCLVKSDITRNWRWADICGELRTNRMILKKELE-SRGVKFRELINSIRISYSISLMKTGEFKIKQIAYQSGFASVSYFSTVFKSTMNVAPSEYLFML- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -63692 for 1727 contacts (-36.9/contact) +
2D Compatibility (PS) -25225 + (NN) -10910 + (LL) 2916
1D Compatibility (HY) -10400 + (ID) 1600
Total energy: -108911.0 ( -63.06 by residue)
QMean score : 0.495
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