Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLLRNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYV----ERKQDVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK
1KU3 Chain:A ((368-428))
----------------------------------------------------------------------------ELEKALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHES-----
General information:
TITO was launched using:
RESULT:
Template:
1KU3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20093 for 359 contacts (-56.0/contact) +
2D Compatibility (PS) -6087 + (NN) -2718 + (LL) 7508
1D Compatibility (HY) 800 + (ID) 300
Total energy: -20890.0 ( -58.19 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1KU3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KU3-query.scw
PDB file :
Tito_Scwrl_1KU3.pdb
: