Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VDSEMNHDFDLEKQFAFFVVNFRMSKHDFEELTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF
3RON Chain:A ((139-179))
------------------------------------------------------LTAAVTNTFTNLNTQKNEAWIFWGKETANQ--TNYTYNVLFAI-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3RON.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2219 for 180 contacts (-12.3/contact) +
2D Compatibility (PS) -4157 + (NN) 362 + (LL) 6296
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -3768.0 ( -20.93 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_3RON.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RON-query.scw
PDB file :
Tito_Scwrl_3RON.pdb
: