Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLVRLKTATTILAPIDFFDDIVLLNATREMQDFVAET---AIKQINQLG-GRFSISINI-PAHYVASSTYMTFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSSLAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVEKLREMKVDYFQGYYFSRPLPMEEIKQKYSIV |
| 3GFZ Chain:A ((182-394)) | ---------------------QAIVEPAKKRVSSFEALIRSPTGGS---PVEMFAAI----AAEDRYRFDLESKAYAFALAGQLPLGKHQLAINLLPGSLYHHPDAVGWLMDSLLAAGLRPDQVLIEVTETEVITCFDQFRKVLKALRVAGMKLAIDDFGAGYSGLSLLTRFQPDKIKVDAELVRDIHISGTKQAIVASVVRCCEDLGITVVAEGVETLEEWCWLQSVGIRLFQGFLFSRP------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74066 for 1632 contacts (-45.4/contact) +
2D Compatibility (PS) -22079 + (NN) -7233 + (LL) 4140
1D Compatibility (HY) -16800 + (ID) 3300
Total energy: -119338.0 ( -73.12 by residue)
QMean score : 0.420
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