Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPTKNHRLPKKHLPIRKSTTRFTKGVVTVSRIDIGEIQTFAYQLHTANEAARKSIKDIKNAVKNYTEDGSLKGKAIDASKNYYQMTYFPLCDAIIEAMNESEERLAQYIADFHAQVDSSADARIDADGLYELGKMIDRIEAKKEALAQRMNTGTEGQMQSYRSQLSIAYKQENILEKYLAFEQSHGGFFDNLTDLVRGIQQTIRELQSNIQFNSKTGTYDMSKLNFTTVTRMQNASGKALNDNAKTFNFDEYQKTYRGQMWVLMKNGIVDVEATNAYNAAVLGGEMPHESNEAQEEAELLQAVVQSVKEGTDPVTGQEISKAQGFGIISGLIFRYTAGGYKGKKFKIPRDWLHRRKKNNGVEVGTDFGKIGKLVNHPNIKINWSEYAEHGMSRLKQRGLSKSQVDDFVEHGKVLSQNEGEKFAFITEDGVAIVSKDGKLVTAWGKKDFDEGMKKIIGKLYGK |
| 4WY4 Chain:B ((1-58)) | --------------------------------------------------------------------------------------------ESWETLEADLIELSQLVTDFSLLVNSQ-------------QEKIDSIADHVNSAAVNVEEGTKNLGKAAKY----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8966 for 222 contacts (40.4/contact) +
2D Compatibility (PS) -6464 + (NN) -2987 + (LL) 24608
1D Compatibility (HY) -2000 + (ID) 650
Total energy: 21473.0 ( 96.73 by residue)
QMean score : 0.340
|
|
|