Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWSFLVVTVLAFVLVLAGCGASNDKVSGDKDKLKVVTTFYPMYDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDME----TWVPSVLKSLD-SKKLTVIDASKGIELV--EGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNIQNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGA--KQRDFVTQHAAFQYLAKEYDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAKLEVLSPIEGITD---KEQKKGMDYIAYMEQNLQALQKTIK |
| 3HH8 Chain:A ((16-292)) | --------------------------------DKLKVVATNSIIADMTKAIAGDKIDLHSIVPIGQDPHEYEPLPEDAEKTSNADVIFYNGINLEDGGQAWFTKLVKNAQKTKNKDYFAVSDGIDVIYLEGASEK-----------GKEDPHAWLNLENGIIYSKNIAKQLIAKDPKNKETYEKNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFVESSVDRRPMETVSKDSG--IPIYSEI--FTDSIAKKGKPGDSYYAMMKWNLDKISEGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HH8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82529 for 2215 contacts (-37.3/contact) +
2D Compatibility (PS) -28368 + (NN) -9681 + (LL) 2860
1D Compatibility (HY) -16800 + (ID) 4250
Total energy: -138768.0 ( -62.65 by residue)
QMean score : 0.568
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