Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNESNGSMELYLREHTEEIINNWLSKIYENTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREFVTAVGDFCIHNDEVSKCEFSSSMAMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFDDALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI |
| 3PMD Chain:A ((4-152)) | MEATKRYLCLYLKESQEKFISNWKKRILVHEH-----DPYKN-EIIKNGTHLLHVFTMYMREE-INLQDIEDISKKIAQERMDAKVNIADFIYNTNEGKKEILNTLFLLN-----PTGQECKVVIEQINLFFDHLIYSTIYSYYKLKKEYIHSYYELKKKY------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -43057 for 1015 contacts (-42.4/contact) +
2D Compatibility (PS) -15465 + (NN) -3069 + (LL) 10032
1D Compatibility (HY) -8000 + (ID) 1250
Total energy: -60809.0 ( -59.91 by residue)
QMean score : 0.539
|
|
|