Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VLDTLNQLSLPEGSLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSIVIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA
3OYG Chain:A ((173-231))
-LNVLTSIAIPK--VIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIK--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OYG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2849 for 312 contacts (-9.1/contact) +
2D Compatibility (PS) -6152 + (NN) -3414 + (LL) 4380
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -11235.0 ( -36.01 by residue)
QMean score : 0.131
(partial model without unconserved sides chains):
PDB file :
Tito_3OYG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OYG-query.scw
PDB file :
Tito_Scwrl_3OYG.pdb
: