Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
1LLD Chain:A ((272-308))
----------------------------------------SDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5449 for 149 contacts (-36.6/contact) +
2D Compatibility (PS) -3953 + (NN) -433 + (LL) 4892
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -6793.0 ( -45.59 by residue)
QMean score : 0.328
(partial model without unconserved sides chains):
PDB file :
Tito_1LLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LLD-query.scw
PDB file :
Tito_Scwrl_1LLD.pdb
: