Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIKGRLIFFFVVLVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
3V86 Chain:A ((1-27))
------------------------------------------------------------YVYQLKDEVGELKGEVRALKDEVKDLK--------------------
General information:
TITO was launched using:
RESULT:
Template:
3V86.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4273 for 104 contacts (41.1/contact) +
2D Compatibility (PS) -2816 + (NN) 321 + (LL) 7592
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 7920.0 ( 76.15 by residue)
QMean score : 0.132
(partial model without unconserved sides chains):
PDB file :
Tito_3V86.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V86-query.scw
PDB file :
Tito_Scwrl_3V86.pdb
: