Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDG-KKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSA-TPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
4U67 Chain:S ((16-175))
-----------------------ESMIAAVAYN-KENNVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPPR-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U67.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82907 for 1046 contacts (-79.3/contact) +
2D Compatibility (PS) -17569 + (NN) -7804 + (LL) 3552
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -119878.0 ( -114.61 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_4U67.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U67-query.scw
PDB file :
Tito_Scwrl_4U67.pdb
: