Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSERSMKRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANLIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVEQIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAARV--QGQQKELKRSVLLAIKITLILSGAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKIAVPAVGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTMLFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLG--------PKDFVFLPFGSKLLALSKLVARK-- |
| 4D10 Chain:B ((34-447)) | VDLENQYYNSKA----------------------------------------------LKEDDPKAALSSFQKVLELEGEKGEWGFKALKQMIKIN--------FKLTNFPEMMNRYKQLLTYIR--------------------------SAVTRNYSEKSINSILDYISTSKQMDLLQEFYETTLEALKDA--------------KNDRLWFKTNTKLGKLYLEREEYGKLQKILRQLHQSCQ-TQLLEIYAL--EIQMYTAQKN-------NKKLKALYEQSLHIKS---AIPHPLIMGVIRECGGKMHLREGEFEKAHTDFFEAFK-NYDESGSPRRTTCLKYLVLANMLMKSGINPFDSQEAKPYKN-DPEILAMTNLVSAYQNNDITEFEKILKTNHSNIMDDPFIRE--HIEELLRNIRTQVLIKLI---KPYTRIHIPFISKE------------------------LNIDVADVESLLVQCILDNTIHGRIDQVNQLLELDHQKRGGARYTALDKWTNQLNSLNQAVVSKLA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -303278 for 2825 contacts (-107.4/contact) +
2D Compatibility (PS) -40402 + (NN) -4346 + (LL) 13612
1D Compatibility (HY) -11600 + (ID) 3350
Total energy: -349364.0 ( -123.67 by residue)
QMean score : 0.235
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